WormBase Tree Display for Variation: WBVar00244458
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WBVar00244458 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244458 | |||
Other_name | snp_F29A7[5] | ||||
F29A7.2.1:c.81-190del | |||||
HGVSg | CHROMOSOME_II:g.2760793del | ||||
Sequence_details | SMap | S_parent | Sequence | F29A7 | |
Flanking_sequences | caaaattagacggtgatttcaaaaa | ggtagtttccagccacttggcaagt | |||
Mapping_target | F29A7 | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00017912 | |||
Transcript | F29A7.2.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F29A7.2.1:c.81-190del | ||||
Intron_number | 2/3 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.8956 VarD1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F29A7.5 | |||||
[20040130 db] this Allele was previously named snp_F29A7.5 | |||||
[20090224 db] original Wicks name : F29A7:13873..14820@116 Psnp=0.8956 VarD1=A | |||||
[20090224 db] original Wicks id : eam67h01.s1@24,-,44 | |||||
Method | SNP_Wicks |