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WormBase Tree Display for Variation: WBVar00244458

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Name Class

WBVar00244458EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00244458
Other_namesnp_F29A7[5]
F29A7.2.1:c.81-190del
HGVSgCHROMOSOME_II:g.2760793del
Sequence_detailsSMapS_parentSequenceF29A7
Flanking_sequencescaaaattagacggtgatttcaaaaaggtagtttccagccacttggcaagt
Mapping_targetF29A7
Type_of_mutationDeletionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00017912
TranscriptF29A7.2.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF29A7.2.1:c.81-190del
Intron_number2/3
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.8956 VarD1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_F29A7.5
[20040130 db] this Allele was previously named snp_F29A7.5
[20090224 db] original Wicks name : F29A7:13873..14820@116 Psnp=0.8956 VarD1=A
[20090224 db] original Wicks id : eam67h01.s1@24,-,44
MethodSNP_Wicks