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WormBase Tree Display for Variation: WBVar00244380

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Name Class

WBVar00244380EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00244380
Other_namesnp_F23H12[2]
F23H12.3a.1:c.120+867dup
F23H12.3a.2:c.120+867dup
HGVSgCHROMOSOME_V:g.12346943dup
Sequence_detailsSMapS_parentSequenceF23H12
Flanking_sequencesaaaattcgcctacagaagtctgggactcccatagttccaacaaaaactac
Mapping_targetF23H12
Type_of_mutationInsertionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00009093
TranscriptF23H12.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF23H12.3a.1:c.120+867dup
Intron_number3/6
F23H12.3a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF23H12.3a.2:c.120+867dup
Intron_number2/5
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.6662 VarI1=A
Enzymes. Bristol-specific: [BsmEI,BsmFI,BspLU11III,BstOZ616I,CviBI,CviCI,CviDI,CviEI,CviFI,CviGI,FnuAI,HhaII,HinfI,HpyAIV,HpyF10II,HpyF18I,HpyF2II,HpyF38I,HpyF44I,HpyF55II,HpyF60I,HpyF71III,HpyF72III,HpyIV,MlyI,NcaI,NovII,NsiHI,PleI,PpsI,SchI,SscL1I,TfiI]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_F23H12.2
[20040130 db] this Allele was previously named snp_F23H12.2
[20090224 db] original Wicks name : F23H12:4977..6832@1122 Psnp=0.6662 VarI1=A
[20090224 db] original Wicks id : yx28f06.s1@458,a,33
[20090224 db] Snip-SNP
MethodSNP_Wicks