WormBase Tree Display for Variation: WBVar00244345
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WBVar00244345 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244345 | |||
Other_name | snp_F22B7[2] | ||||
cewivar00108343 | |||||
F22B7.7.1:c.298-132C>G | |||||
HGVSg | CHROMOSOME_III:g.8642022G>C | ||||
Sequence_details | SMap | S_parent | Sequence | F22B7 | |
Flanking_sequences | actctatctatatatgttttttttt | aaatttcttatacctttagctctgg | |||
Mapping_target | F22B7 | ||||
Type_of_mutation | Substitution | G | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (27) | |||||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006662 | |||
Transcript | F22B7.7.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F22B7.7.1:c.298-132C>G | ||||
Intron_number | 4/15 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9328 VarS=CG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F22B7.2 | |||||
[20040130 db] this Allele was previously named snp_F22B7.2 | |||||
[20090224 db] original Wicks name : F22B7:15012..15924@324 Psnp=0.9328 VarS=CG | |||||
[20090224 db] original Wicks id : vd53e12.s1@532,c,47 | |||||
Method | SNP_Wicks |