WormBase Tree Display for Variation: WBVar00244300

WBVar00244300 Name: Public_name: WBVar00244300
    Other_name: snp_F19B10[3]
      haw128900
      cewivar00183412
      F19B10.7.1:c.-2-308C>T
    HGVSg: CHROMOSOME_II:g.3668974G>A
  Sequence_details: SMap: S_parent: Sequence: F19B10
    Flanking_sequences: cactcgtgttccacataaagcagaa aaatttctaggccacgcgtgacgtc
    Mapping_target: F19B10
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: AX
    Person: WBPerson4037
    Analysis: SNP_Wicks
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01368342
        WBVar00548765
    Status: Live
  Affects: Gene: WBGene00005988
    Transcript: F19B10.7.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F19B10.7.1:c.-2-308C>T
        Intron_number: 1/10
  Reference: WBPaper00038208
    WBPaper00004703
    WBPaper00037807
  Remark: Predicted SNP: Psnp=0.8657 VarS=AG
    Enzymes. Bristol-specific: [Hpy178II,HpyAII,HpyII,MboII,NcuI,TceI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_F19B10.3
    [20040130 db] this Allele was previously named snp_F19B10.3
    [20090224 db] original Wicks name : F19B10:20299..21420@648 Psnp=0.8657 VarS=AG
    [20090224 db] original Wicks id : yw98e11.s1@413,a,38
    [20090224 db] Snip-SNP
  Method: SNP_Wicks