WormBase Tree Display for Variation: WBVar00244258
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WBVar00244258 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244258 | |||
Other_name | snp_F15E6[2] | ||||
cewivar00692180 | |||||
F15E6.7b.1:c.*205+26_*206-26del | |||||
F15E6.7a.1:c.914+26_915-26del | |||||
HGVSg | CHROMOSOME_IV:g.4285499_4285501del | ||||
Sequence_details | SMap | S_parent | Sequence | F15E6 | |
Flanking_sequences | ctgaaactttgaaatttcaaaatta | ttagttttttttcttaaaaaccaac | |||
Mapping_target | F15E6 | ||||
Type_of_mutation | Deletion | TTT | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00005715 | |||
Transcript | F15E6.7b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F15E6.7b.1:c.*205+26_*206-26del | ||||
Intron_number | 7/7 | ||||
F15E6.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F15E6.7a.1:c.914+26_915-26del | ||||
Intron_number | 6/6 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9221 VarD3=TTT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F15E6.2 | |||||
[20040130 db] this Allele was previously named snp_F15E6.2 | |||||
[20090224 db] original Wicks name : F15E6:6142..6917@451 Psnp=0.9221 VarD3=TTT | |||||
[20090224 db] original Wicks id : yy61a12.s1@272,-,59 | |||||
Method | SNP_Wicks |