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WormBase Tree Display for Variation: WBVar00244258

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Name Class

WBVar00244258EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00244258
Other_namesnp_F15E6[2]
cewivar00692180
F15E6.7b.1:c.*205+26_*206-26del
F15E6.7a.1:c.914+26_915-26del
HGVSgCHROMOSOME_IV:g.4285499_4285501del
Sequence_detailsSMapS_parentSequenceF15E6
Flanking_sequencesctgaaactttgaaatttcaaaattattagttttttttcttaaaaaccaac
Mapping_targetF15E6
Type_of_mutationDeletionTTT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00005715
TranscriptF15E6.7b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF15E6.7b.1:c.*205+26_*206-26del
Intron_number7/7
F15E6.7a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF15E6.7a.1:c.914+26_915-26del
Intron_number6/6
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9221 VarD3=TTT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_F15E6.2
[20040130 db] this Allele was previously named snp_F15E6.2
[20090224 db] original Wicks name : F15E6:6142..6917@451 Psnp=0.9221 VarD3=TTT
[20090224 db] original Wicks id : yy61a12.s1@272,-,59
MethodSNP_Wicks