WormBase Tree Display for Variation: WBVar00244257

WBVar00244257 Name: Public_name: WBVar00244257
    Other_name: snp_F15D4[9]
      haw135449
      cewivar00187876
      F15D4.4.1:c.354+100A>T
    HGVSg: CHROMOSOME_II:g.13242642T>A
  Sequence_details: SMap: S_parent: Sequence: F15D4
    Flanking_sequences: tcaactccggcaatttgccagaaat tcagtttcggcaatttgccggtttg
    Mapping_target: F15D4
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: AX
    Person: WBPerson4037
    Analysis: SNP_Wicks
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00555314
        WBVar01381251
    Status: Live
  Affects: Gene: WBGene00008861
    Transcript: F15D4.4.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F15D4.4.1:c.354+100A>T
        Intron_number: 2/9
  Reference: WBPaper00038208
    WBPaper00004703
    WBPaper00037807
  Remark: Predicted SNP: Psnp=0.9226 VarS=AT
    Enzymes. Bristol-specific: [AcsI,ApoI,FsiI,MluCI,Sse9I,TasI,TseCI,Tsp509I,TspEI,XapI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_F15D4.9
    [20040130 db] this Allele was previously named snp_F15D4.9
    [20090224 db] original Wicks name : F15D4:29223..30009@562 Psnp=0.9226 VarS=AT
    [20090224 db] original Wicks id : vr78b06.s1@534,a,44
    [20090224 db] Snip-SNP
  Method: SNP_Wicks