WormBase Tree Display for Variation: WBVar00244213
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WBVar00244213 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244213 | |||
Other_name | snp_F14D7[1] | ||||
cewivar00244260 | |||||
F14D7.16:n.89C>T | |||||
HGVSg | CHROMOSOME_V:g.14309727G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F14D7 | |
Flanking_sequences | agtgcattcagaaatgaatatatcg | ttgcttctttatttgattgaaccattgggaatccagttgc | |||
Mapping_target | F14D7 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00077575 | |||
Pseudogene | F14D7.16 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F14D7.16:n.89C>T | ||||
cDNA_position | 89 | ||||
Exon_number | 1/1 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9427 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F14D7.1 | |||||
[20040130 db] this Allele was previously named snp_F14D7.1 | |||||
[20090224 db] original Wicks name : F14D7:21824..22771@544 Psnp=0.9427 VarS=AG | |||||
[20090224 db] original Wicks id : eam55e11.s1@328,a,59 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |