WormBase Tree Display for Variation: WBVar00244182

WBVar00244182 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00244182
    Other_name: snp_F13D11[4]
      F13D11.21:n.479_480insT
    HGVSg: CHROMOSOME_X:g.5818254dup
  Sequence_details: SMap: S_parent: Sequence: F13D11
    Flanking_sequences: gataaaagtcggagggcggagtgga cgtcaaccgaaacattgcactctta
    Mapping_target: F13D11
    Type_of_mutation: Insertion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00201836
    Transcript: F13D11.21 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: F13D11.21:n.479_480insT
        cDNA_position: 479-480
        Exon_number: 1/1
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8888 VarI1=A
    Enzymes. Bristol-specific: [AatII,AcyI,AhaII,AosII,AspJI,AstWI,AsuIII,BbiII,BsaHI,BsmCI,BsmDI,BsmXI,BstACI,HgiDI,HgiGI,HgiHII,HgiI,Hin1I,Hin8I,Hpy166II,Hpy8I,HpyBII,HpyF14II,HpyF46III,HpyF49III,HpyF50I,HpyF7III,Hsp92I,Msp17I,NlaSII,PamII,Ppu1253I,Ssp5230I,SspJII,SspM1II,SspM2II,Uba1381I]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_F13D11.4
    [20040130 db] this Allele was previously named snp_F13D11.4
    [20090224 db] original Wicks name : F13D11:13322..14261@593 Psnp=0.8888 VarI1=A
    [20090224 db] original Wicks id : yy48g06.s1@297,a,47 yy48g04.s1@294,a,53
    [20090224 db] Snip-SNP
  Method: SNP_Wicks