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WormBase Tree Display for Variation: WBVar00244160

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Name Class

WBVar00244160EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00244160
Other_namesnp_F11D11[8]
F11D11.3.1:c.1010-25A>T
HGVSgCHROMOSOME_V:g.18758182T>A
Sequence_detailsSMapS_parentSequenceF11D11
Flanking_sequencestctgcaaagttggtaattattttttaaaaaagtaaaaaagaagagaaaac
Mapping_targetF11D11
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00008698
TranscriptF11D11.3.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF11D11.3.1:c.1010-25A>T
Intron_number6/7
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9328 VarS=AT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_F11D11.8
[20040130 db] this Allele was previously named snp_F11D11.8
[20090224 db] original Wicks name : F11D11:19647..20699@831 Psnp=0.9328 VarS=AT
[20090224 db] original Wicks id : vl20d01.s1@161,a,47
MethodSNP_Wicks