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WormBase Tree Display for Variation: WBVar00244151

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Name Class

WBVar00244151EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00244151
Other_namesnp_F11D5[3]
F11D5.3b.2:c.1841+58dup
F11D5.3b.1:c.1841+58dup
F11D5.3a.1:c.1931+58dup
HGVSgCHROMOSOME_X:g.3323180dup
Sequence_detailsSMapS_parentSequenceF11D5
Flanking_sequencesTTTGTGCATTAATGGTGAAAGATTTATAGCTTGAACTTGAGAAAAAAAAATTTCTTTACCTGTAGCTCGAAAGTTATGTCCTAGACTCCCAGTGCTCCAT
Mapping_targetF11D5
Type_of_mutationInsertionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00017381
TranscriptF11D5.3b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF11D5.3b.2:c.1841+58dup
Intron_number13/14
F11D5.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF11D5.3b.1:c.1841+58dup
Intron_number12/14
F11D5.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF11D5.3a.1:c.1931+58dup
Intron_number13/15
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9195 VarI1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_F11D5.3
[20040130 db] this Allele was previously named snp_F11D5.3
[20090224 db] original Wicks name : F11D5:21292..21891@331 Psnp=0.9195 VarI1=A
[20090224 db] original Wicks id : hz76c11.s1@290,a,53
MethodSNP_Wicks