WormBase Tree Display for Variation: WBVar00244093

WBVar00244093 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00244093
    Other_name: snp_F09E10[9]
      cewivar00269010
      F09E10.6.1:c.-10A>T
    HGVSg: CHROMOSOME_X:g.1497631T>A
  Sequence_details: SMap: S_parent: Sequence: F09E10
    Flanking_sequences: tcagagctctgagcatttgaagtct gggactctatgccaaaactgaagcc
    Mapping_target: F09E10
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00017296
    Transcript: F09E10.6.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F09E10.6.1:c.-10A>T
        cDNA_position: 51
        Exon_number: 1/6
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8961 VarS=AT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_F09E10.9
    [20040130 db] this Allele was previously named snp_F09E10.9
    [20090224 db] original Wicks name : F09E10:9884..11231@824 Psnp=0.8961 VarS=AT
    [20090224 db] original Wicks id : vl21f12.s1@755,a,9 vr77b06.s1@470,a,62
    [20090224 db] Snip-SNP
  Method: SNP_Wicks