WormBase Tree Display for Variation: WBVar00244091
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WBVar00244091 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244091 | |||
Other_name | snp_F09E10[7] | ||||
F09E10.6.1:c.67+292del | |||||
HGVSg | CHROMOSOME_X:g.1497263del | ||||
Sequence_details | SMap | S_parent | Sequence | F09E10 | |
Flanking_sequences | tataatattttgcagaatttttttt | ccaaatttccaaaatgatttcagaa | |||
Mapping_target | F09E10 | ||||
Type_of_mutation | Deletion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00017296 | |||
Transcript | F09E10.6.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F09E10.6.1:c.67+292del | ||||
Intron_number | 2/5 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9212 VarD1=T | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F09E10.7 | |||||
[20040130 db] this Allele was previously named snp_F09E10.7 | |||||
[20090224 db] original Wicks name : F09E10:9884..11231@456 Psnp=0.9212 VarD1=T | |||||
[20090224 db] original Wicks id : vl21f12.s1@388,-,56 | |||||
Method | SNP_Wicks |