WormBase Tree Display for Variation: WBVar00244057
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WBVar00244057 | Name | Public_name | WBVar00244057 | ||
---|---|---|---|---|---|
Other_name | snp_F08D12[9] | ||||
cewivar00120701 | |||||
F08D12.2.1:c.404-128T>A | |||||
HGVSg | CHROMOSOME_II:g.2782557T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F08D12 | |
Flanking_sequences | atagtaaataaaaaattttcaaaaa | tttttgaaaagttttatattgatat | |||
Mapping_target | F08D12 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | SNP_Wicks | |||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Analysis | SNP_Wicks | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01365087 | |||
Status | Live | ||||
Affects | Gene | WBGene00017246 | |||
Transcript | F08D12.2.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F08D12.2.1:c.404-128T>A | ||||
Intron_number | 5/8 | ||||
Reference | WBPaper00004703 | ||||
WBPaper00037807 | |||||
Remark | Predicted SNP: Psnp=0.9427 VarS=AT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F08D12.9 | |||||
[20040130 db] this Allele was previously named snp_F08D12.9 | |||||
[20090224 db] original Wicks name : F08D12:17460..18436@385 Psnp=0.9427 VarS=AT | |||||
[20090224 db] original Wicks id : eam69c02.s1@318,a,59 | |||||
Method | SNP_Wicks |