WormBase Tree Display for Variation: WBVar00244025
expand all nodes | collapse all nodes | view schema
WBVar00244025 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244025 | |||
Other_name | snp_F02E8[2] | ||||
cewivar00272821 | |||||
F02E8.6.2:c.743C>A | |||||
F02E8.6.1:c.743C>A | |||||
CE29251:p.Thr248Lys | |||||
HGVSg | CHROMOSOME_X:g.4478174G>T | ||||
Sequence_details | SMap | S_parent | Sequence | F02E8 | |
Flanking_sequences | gtactcttccttgttgcactctgac | ttgaacaagccggccagccgactcg | |||
Mapping_target | F02E8 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003561 | |||
Transcript | F02E8.6.2 (12) | ||||
F02E8.6.1 (12) | |||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9427 VarS=GT | ||||
Enzymes. Bristol-specific: [HpyCH4IV,HpyF13III,HpyF35II,HpyF74II,MaeII,TaiI,TscI,Tsp49I,TspIDSI,TspWAM8AI,TtmI]. CB4856-specific [none]. | |||||
[20040130 db] this Locus was previously named snp_F02E8.2 | |||||
[20040130 db] this Allele was previously named snp_F02E8.2 | |||||
[20090224 db] original Wicks name : F02E8:30226..31044@275 Psnp=0.9427 VarS=GT | |||||
[20090224 db] original Wicks id : yy61h06.s1@228,t,59 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |