WormBase Tree Display for Variation: WBVar00243970

WBVar00243970 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00243970
    Other_name: snp_E01G4[3]
      E01G4.3c.1:c.24+140_24+141del
    HGVSg: CHROMOSOME_II:g.13469438_13469439del
  Sequence_details: SMap: S_parent: Sequence: E01G4
    Flanking_sequences: catgcacccagagatcgattgcaga tcagtgataagcgatagatcacgta
    Mapping_target: E01G4
    Type_of_mutation: Deletion: TA
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00008446
    Transcript: E01G4.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: E01G4.3c.1:c.24+140_24+141del
        Intron_number: 1/4
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.5217 VarD2=TA
    Enzymes. Bristol-specific: [Bsc217I,BshLI,BsoAI,Bsp16I,BstRI,CeqI,Eco178I,Eco17I,Eco32I,EcoRV,HjaI,HpyCI,NanI,NflAI,NsiCI,Pac1110II,Pfl16I,Rma495II,Rma496II,Rma497II,SmiMII,Tsp273I,Uba1400I]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_E01G4.3
    [20040130 db] this Allele was previously named snp_E01G4.3
    [20090224 db] original Wicks name : E01G4:27316..28292@805 Psnp=0.5217 VarD2=TA
    [20090224 db] original Wicks id : eam31h05.s1@100,-,30
    [20090224 db] Snip-SNP
  Method: SNP_Wicks