WormBase Tree Display for Variation: WBVar00243754

WBVar00243754 Name: Public_name: WBVar00243754
    Other_name: snp_C50E3[1]
      haw167947
      cewivar00237520
      C50E3.5.1:c.487-1394A>G
    HGVSg: CHROMOSOME_V:g.7591991A>G
  Sequence_details: SMap: S_parent: Sequence: C50E3
    Flanking_sequences: aaccactctaacaatttctcatctc cctatcagagcaaacactgcgaaac
    Mapping_target: C50E3
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (22)
    Laboratory: QX
    Person: WBPerson4037
      WBPerson1730
    Analysis: SNP_Wicks
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Andersen
    History: Acquires_merge: WBVar01460722
        WBVar00587812
    Status: Live
  Affects: Gene: WBGene00016816
    Transcript: C50E3.5.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C50E3.5.1:c.487-1394A>G
        Intron_number: 3/8
  Reference: WBPaper00038208
    WBPaper00040707
    WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9407 VarS=AG
    Enzymes. Bristol-specific: [AsuHPI,HphI,NgoBVIII,NgoDVIII,NgoJVIII,NgoMVIII,SspD5I]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_C50E3.1
    [20040130 db] this Allele was previously named snp_C50E3.1
    [20090224 db] original Wicks name : C50E3:3908..4728@617 Psnp=0.9407 VarS=AG
    [20090224 db] original Wicks id : yy60e07.s1@557,g,53
    [20090224 db] Snip-SNP
  Method: SNP_Wicks