WormBase Tree Display for Variation: WBVar00243715

WBVar00243715 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00243715
    Other_name: snp_C48G7[4]
      C48G7.3g.1:c.947-208T>A
      C48G7.3i.1:c.131-208T>A
      C48G7.3f.1:c.1262-208T>A
      C48G7.3a.1:c.1697-208T>A
    HGVSg: CHROMOSOME_V:g.14804200A>T
  Sequence_details: SMap: S_parent: Sequence: C48G7
    Flanking_sequences: cccaccaggagcatcaaatttttga tttcggaaaaaatcaaattctgata
    Mapping_target: C48G7
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00008183
    Transcript: C48G7.3i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48G7.3i.1:c.131-208T>A
        Intron_number: 1/16
      C48G7.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48G7.3a.1:c.1697-208T>A
        Intron_number: 10/26
      C48G7.3g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48G7.3g.1:c.947-208T>A
        Intron_number: 7/22
      C48G7.3f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48G7.3f.1:c.1262-208T>A
        Intron_number: 8/23
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9427 VarS=AT
    Enzymes. Bristol-specific: [AcsI,ApoI,FsiI,MluCI,Sse9I,TasI,TseCI,Tsp509I,TspEI,XapI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_C48G7.4
    [20040130 db] this Allele was previously named snp_C48G7.4
    [20090224 db] original Wicks name : C48G7:16556..17703@901 Psnp=0.9427 VarS=AT
    [20090224 db] original Wicks id : yw17g02.s1@185,t,59
    [20090224 db] Snip-SNP
  Method: SNP_Wicks