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WormBase Tree Display for Variation: WBVar00243669

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Name Class

WBVar00243669EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00243669
Other_namesnp_C47D2[2]
C17H11.6d.1:c.296+724_296+725insT
C17H11.6c.3:c.-50+724_-50+725insT
C17H11.6c.2:c.-50+724_-50+725insT
HGVSgCHROMOSOME_X:g.8202652dup
Sequence_detailsSMapS_parentSequenceC47D2
Flanking_sequencesacgaatttgattttgaaaaaaaaaactgaagccatttggtttcttaaaaa
Mapping_targetC47D2
Type_of_mutationInsertionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00015926
TranscriptC17H11.6c.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC17H11.6c.3:c.-50+724_-50+725insT
Intron_number1/17
C17H11.6d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC17H11.6d.1:c.296+724_296+725insT
Intron_number2/16
C17H11.6c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC17H11.6c.2:c.-50+724_-50+725insT
Intron_number2/18
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.7424 VarI1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_C47D2.2
[20040130 db] this Allele was previously named snp_C47D2.2
[20090224 db] original Wicks name : C47D2:1426..2557@668 Psnp=0.7424 VarI1=A
[20090224 db] original Wicks id : eam84c11.s1@393,a,35
MethodSNP_Wicks