WormBase Tree Display for Variation: WBVar00243591
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WBVar00243591 | Name | Public_name | WBVar00243591 | ||
---|---|---|---|---|---|
Other_name | snp_C41D11[3] | ||||
haw116774 | |||||
cewivar00165403 | |||||
C41D11.9.1:c.71+74T>C | |||||
HGVSg | CHROMOSOME_I:g.4449630A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C41D11 | |
Flanking_sequences | tttgaggttttggctgaaattaacc | ccataattaattttttttttcgaag | |||
Mapping_target | C41D11 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00536639 | |||
WBVar01282065 | |||||
Status | Live | ||||
Affects | Gene | WBGene00016567 | |||
Transcript | C41D11.9.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C41D11.9.1:c.71+74T>C | ||||
Intron_number | 1/3 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
WBPaper00037807 | |||||
Remark | Predicted SNP: Psnp=0.9427 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_C41D11.3 | |||||
[20040130 db] this Allele was previously named snp_C41D11.3 | |||||
[20090224 db] original Wicks name : C41D11:25990..26926@658 Psnp=0.9427 VarS=AG | |||||
[20090224 db] original Wicks id : eam37g05.s1@208,g,59 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |