WormBase Tree Display for Variation: WBVar00243425
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WBVar00243425 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00243425 | |||
Other_name | snp_C32A9[1] | ||||
C14H10.2c.1:c.20+123_20+124insT | |||||
C14H10.2a.1:c.20+123_20+124insT | |||||
HGVSg | CHROMOSOME_X:g.10252665dup | ||||
Sequence_details | SMap | S_parent | Sequence | C32A9 | |
Flanking_sequences | ccaatttttggtagaacaaaaaaaa | gaaatatgtaaatgaatcattatca | |||
Mapping_target | C32A9 | ||||
Type_of_mutation | Insertion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00007592 | |||
Transcript | C14H10.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C14H10.2a.1:c.20+123_20+124insT | ||||
Intron_number | 2/17 | ||||
C14H10.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C14H10.2c.1:c.20+123_20+124insT | ||||
Intron_number | 2/16 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9221 VarI1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_C32A9.1 | |||||
[20040130 db] this Allele was previously named snp_C32A9.1 | |||||
[20090224 db] original Wicks name : C32A9:7341..8229@175 Psnp=0.9221 VarI1=A | |||||
[20090224 db] original Wicks id : vd48f01.s1@111,a,59 | |||||
Method | SNP_Wicks |