WormBase Tree Display for Variation: WBVar00243323

WBVar00243323 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00243323
    Other_name: snp_C18H9[3]
      H43E16.1a.1:c.3370G>C
      H43E16.1b.1:c.2548G>C
      CE52232:p.Ala850Pro
      CE19949:p.Ala1124Pro
    HGVSg: CHROMOSOME_II:g.6679003G>C
  Sequence_details: SMap: S_parent: Sequence: C18H9
    Flanking_sequences: atggcttcatgctaatagagatcca ctggaacaaatgcagttatcattat
    Mapping_target: C18H9
    Type_of_mutation: Substitution: G C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00019273
    Transcript: H43E16.1a.1 (12)
      H43E16.1b.1 (12)
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9301 VarS=CG
    Enzymes. Bristol-specific: [AluI,BavAI,BavBI,BavI,BsaLI,Bsp153AI,BspM39I,BspO4I,Cfr6I,CviJI,CviKI,CviLI,CviMI,CviNI,CviOI,CviTI,DmaI,EclI,GspI,MarI,MltI,MspA1I,MziI,NmeRI,NspBII,OtuI,OtuNI,OxaI,Pae17kI,Psp3I,Psp5I,Pvu84II,PvuHKUI,PvuII,SbaI,SciAII,SmaAIV,Sol3335I,SpaPIII,SplAIV,Uba1227I,Uba1245I,Uba1433I,Uba1441I]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_C18H9.3
    [20040130 db] this Allele was previously named snp_C18H9.3
    [20090224 db] original Wicks name : C18H9:1423..2851@100 Psnp=0.9301 VarS=CG
    [20090224 db] original Wicks id : yy49c02.s1@43,c,46
    [20090224 db] Snip-SNP
  Method: SNP_Wicks