WormBase Tree Display for Variation: WBVar00243287

WBVar00243287 Name: Public_name: WBVar00243287
    Other_name: snp_C16C8[8]
      cewivar00010146
      CE08219:p.Asp20=
      C16C8.8.1:c.60C>T
    HGVSg: CHROMOSOME_II:g.3461622G>A
  Sequence_details: SMap: S_parent: Sequence: C16C8
    Flanking_sequences: gatttgcagcaggtgaactagggga tcgtgcccaaaacccagggagagtc
    Mapping_target: C16C8
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (34)
    Laboratory: AX
    Analysis: SNP_Wicks
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01367862
        WBVar01236625
        WBVar01302790
    Status: Live
  Affects: Gene: WBGene00015846
    Transcript: C16C8.8.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C16C8.8.1:c.60C>T
        HGVSp: CE08219:p.Asp20=
        cDNA_position: 65
        CDS_position: 60
        Protein_position: 20
        Exon_number: 2/5
        Codon_change: gaC/gaT
        Amino_acid_change: D
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: Predicted SNP: Psnp=0.7349 VarS=AG
    Enzymes. Bristol-specific: [BsmEI,MlyI,PleI,PpsI,SchI,TfiI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_C16C8.8
    [20040130 db] this Allele was previously named snp_C16C8.8
    [20090224 db] original Wicks name : C16C8:37808..38491@316 Psnp=0.7349 VarS=AG
    [20090224 db] original Wicks id : vr78g07.s1@249,a,33
    [20090224 db] Snip-SNP
  Method: SNP_Wicks