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WormBase Tree Display for Variation: WBVar00243286

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Name Class

WBVar00243286EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00243286
Other_namesnp_C16C8[5]
C16C8.13.1:c.-9+6_-9+7insTA
C16C8.20.1:c.81+6_81+7insTA
C16C8.13.2:c.-9+6_-9+7insTA
HGVSgCHROMOSOME_II:g.3447043_3447044insTA
Sequence_detailsSMapS_parentSequenceC16C8
Flanking_sequencesatacaatgaattcacagaggtgagaataataataataatttattacgctc
Mapping_targetC16C8
Type_of_mutationInsertionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00015851
WBGene00195070
WBGene00305274
WBGene00305273
TranscriptC16C8.29
C16C8.13.2VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScC16C8.13.2:c.-9+6_-9+7insTA
Intron_number1/5
C16C8.28
C16C8.20.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScC16C8.20.1:c.81+6_81+7insTA
Intron_number2/4
C16C8.13.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScC16C8.13.1:c.-9+6_-9+7insTA
Intron_number1/5
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.8956 VarI2=TA
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_C16C8.5
[20040130 db] this Allele was previously named snp_C16C8.5
[20090224 db] original Wicks name : C16C8:23268..24168@277 Psnp=0.8956 VarI2=TA
[20090224 db] original Wicks id : eam51g03.s1@211,a,44
MethodSNP_Wicks