WormBase Tree Display for Variation: WBVar00243253
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WBVar00243253 | Name | Public_name | WBVar00243253 | ||
---|---|---|---|---|---|
Other_name | snp_C14C6[2] | ||||
haw159857 | |||||
cewivar00220050 | |||||
C14C6.9.1:c.320+50A>T | |||||
HGVSg | CHROMOSOME_V:g.555269T>A | ||||
Sequence_details | SMap | S_parent | Sequence | C14C6 | |
Flanking_sequences | ttatgccgacgaacaagtatttcaa | ttttgaaaattttcggcacctcgtg | |||
Mapping_target | C14C6 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00579722 | |||
Status | Live | ||||
Affects | Gene | WBGene00005899 | |||
Transcript | C14C6.9.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C14C6.9.1:c.320+50A>T | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | Predicted SNP: Psnp=0.6951 VarS=AT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_C14C6.2 | |||||
[20040130 db] this Allele was previously named snp_C14C6.2 | |||||
[20090224 db] original Wicks name : C14C6:18659..19224@292 Psnp=0.6951 VarS=AT | |||||
[20090224 db] original Wicks id : yx25b02.s1@213,a,32 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |