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WormBase Tree Display for Variation: WBVar00243253

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Name Class

WBVar00243253NamePublic_nameWBVar00243253
Other_namesnp_C14C6[2]
haw159857
cewivar00220050
C14C6.9.1:c.320+50A>T
HGVSgCHROMOSOME_V:g.555269T>A
Sequence_detailsSMapS_parentSequenceC14C6
Flanking_sequencesttatgccgacgaacaagtatttcaattttgaaaattttcggcacctcgtg
Mapping_targetC14C6
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
PersonWBPerson4037
AnalysisSNP_Wicks
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00579722
StatusLive
AffectsGeneWBGene00005899
TranscriptC14C6.9.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC14C6.9.1:c.320+50A>T
Intron_number2/4
ReferenceWBPaper00038208
WBPaper00004703
RemarkPredicted SNP: Psnp=0.6951 VarS=AT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_C14C6.2
[20040130 db] this Allele was previously named snp_C14C6.2
[20090224 db] original Wicks name : C14C6:18659..19224@292 Psnp=0.6951 VarS=AT
[20090224 db] original Wicks id : yx25b02.s1@213,a,32
[20090224 db] Snip-SNP
MethodSNP_Wicks