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WormBase Tree Display for Variation: WBVar00243240

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Name Class

WBVar00243240EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00243240
Other_namesnp_C14A4[2]
C14A4.12a.1:c.-92dup
C14A4.12b.1:c.-92dup
HGVSgCHROMOSOME_II:g.10613102dup
Sequence_detailsSMapS_parentSequenceC14A4
Flanking_sequencestctcaccttttttccacaaaaaaaagcgtgtaaatatcaaatatctcatg
Mapping_targetC14A4
Type_of_mutationInsertionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00007562
TranscriptC14A4.12b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC14A4.12b.1:c.-92dup
cDNA_position60-61
Exon_number1/15
C14A4.12a.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC14A4.12a.1:c.-92dup
cDNA_position27-28
Exon_number1/16
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9221 VarI1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_C14A4.2
[20040130 db] this Allele was previously named snp_C14A4.2
[20090224 db] original Wicks name : C14A4:32873..33664@374 Psnp=0.9221 VarI1=A
[20090224 db] original Wicks id : vr92c10.s1@350,a,59
MethodSNP_Wicks