WormBase Tree Display for Variation: WBVar00243138

WBVar00243138 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00243138
    Other_name: snp_C08G9[1]
      C08G9.10:n.78_79insT
      F33D4.2a.1:c.80-876dup
    HGVSg: CHROMOSOME_IV:g.7676603dup
  Sequence_details: SMap: S_parent: Sequence: F33D4
    Flanking_sequences: aaaataccgaaatcgacaatcataa taaaacactccacaatttttgattt
    Mapping_target: F33D4
    Type_of_mutation: Insertion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00002173
      WBGene00200730
    Transcript: F33D4.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F33D4.2a.1:c.80-876dup
        Intron_number: 1/33
      C08G9.10 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: C08G9.10:n.78_79insT
        cDNA_position: 78-79
        Exon_number: 1/1
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.4688 VarI1=A
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_C08G9.1
    [20040130 db] this Allele was previously named snp_C08G9.1
    [20090224 db] original Wicks name : C08G9:26645..27626@121 Psnp=0.4688 VarI1=A
    [20090224 db] original Wicks id : eam47e04.s1@54,a,29
  Method: SNP_Wicks