WormBase Tree Display for Variation: WBVar00243068
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WBVar00243068 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00243068 | |||
Other_name | snp_C06G1[4] | ||||
F43B10.1d.1:c.2365-4321_2365-4320insCA | |||||
F43B10.1a.1:c.478-4321_478-4320insCA | |||||
HGVSg | CHROMOSOME_X:g.16646614_16646615dup | ||||
Sequence_details | SMap | S_parent | Sequence | F43B10 | |
Flanking_sequences | atgtatgtgtgtgtgtgtgtgtgtg | gacgaagttgagaaggttgagaata | |||
Mapping_target | F43B10 | ||||
Type_of_mutation | Insertion | TG | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00018373 | |||
Transcript | F43B10.1d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F43B10.1d.1:c.2365-4321_2365-4320insCA | ||||
Intron_number | 2/12 | ||||
F43B10.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F43B10.1a.1:c.478-4321_478-4320insCA | ||||
Intron_number | 5/15 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.8415 VarI2=TG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_C06G1.4 | |||||
[20040130 db] this Allele was previously named snp_C06G1.4 | |||||
[20090224 db] original Wicks name : C06G1:36631..37569@521 Psnp=0.8415 VarI2=TG | |||||
[20090224 db] original Wicks id : yw10b05.s1@348,g,39 | |||||
Method | SNP_Wicks |