WormBase Tree Display for Variation: WBVar00243043

WBVar00243043 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00243043
    Other_name: snp_C05E4[1]
      C05E4.11.1:c.189+15del
    HGVSg: CHROMOSOME_V:g.738667del
  Sequence_details: SMap: S_parent: Sequence: C05E4
    Flanking_sequences: caaaactaataacaaagtttttaaa tcagatttttttaccagcggcacaa
    Mapping_target: C05E4
    Type_of_mutation: Deletion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00005612
    Transcript: C05E4.11.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C05E4.11.1:c.189+15del
        Intron_number: 1/7
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8803 VarD1=A
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_C05E4.1
    [20040130 db] this Allele was previously named snp_C05E4.1
    [20090224 db] original Wicks name : C05E4:14123..15026@114 Psnp=0.8803 VarD1=A
    [20090224 db] original Wicks id : yw08a01.s1@32,-,42
  Method: SNP_Wicks