WormBase Tree Display for Variation: WBVar00243024

WBVar00243024 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00243024
    Other_name: snp_C04H5[3]
      C04H5.1.1:c.144+180del
    HGVSg: CHROMOSOME_II:g.14534623del
  Sequence_details: SMap: S_parent: Sequence: C04H5
    Flanking_sequences: ttttttcagaattccaaggaaaaaa ttaactcaaaactaaaaaaaaaatg
    Mapping_target: C04H5
    Type_of_mutation: Deletion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00007312
    Transcript: C04H5.1.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C04H5.1.1:c.144+180del
        Intron_number: 1/2
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9221 VarD1=A
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_C04H5.3
    [20040130 db] this Allele was previously named snp_C04H5.3
    [20090224 db] original Wicks name : C04H5:1289..2226@762 Psnp=0.9221 VarD1=A
    [20090224 db] original Wicks id : yy48e09.s1@131,-,59
  Method: SNP_Wicks