Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00242999

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00242999EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00242999
Other_namesnp_C04D8[3]
C04D8.1a.1:c.1397-1597dup
C04D8.1g.1:c.311-1597dup
C04D8.1b.1:c.1394-1597dup
C04D8.1f.1:c.1394-1597dup
HGVSgCHROMOSOME_III:g.8506033dup
Sequence_detailsSMapS_parentSequenceC04D8
Flanking_sequencesccacataaaatgactctttccccccatttctctatttgtattcagatggc
Mapping_targetC04D8
Type_of_mutationInsertionC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00015418
TranscriptC04D8.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC04D8.1a.1:c.1397-1597dup
Intron_number8/19
C04D8.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC04D8.1f.1:c.1394-1597dup
Intron_number9/20
C04D8.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC04D8.1b.1:c.1394-1597dup
Intron_number9/20
C04D8.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC04D8.1g.1:c.311-1597dup
Intron_number3/14
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9195 VarI1=C
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_C04D8.3
[20040130 db] this Allele was previously named snp_C04D8.3
[20090224 db] original Wicks name : C04D8:8176..9171@431 Psnp=0.9195 VarI1=C
[20090224 db] original Wicks id : eam32b04.s1@500,c,53
MethodSNP_Wicks