WormBase Tree Display for Variation: WBVar00242921

WBVar00242921 Name: Public_name: WBVar00242921
    Other_name: snp_C01G12[4]
      cewivar00189305
      C01G12.3.1:c.85-16A>C
    HGVSg: CHROMOSOME_II:g.14582057T>G
  Sequence_details: SMap: S_parent: Sequence: C01G12
    Flanking_sequences: tcagcaaaatctggaagaaaatagg gctttttcttccaagagtctgccgc
    Mapping_target: C01G12
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: SNP_Wicks
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01384960
    Status: Live
  Affects: Gene: WBGene00007244
    Transcript: C01G12.3.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C01G12.3.1:c.85-16A>C
        Intron_number: 2/4
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: Predicted SNP: Psnp=0.9430 VarS=GT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_C01G12.4
    [20040130 db] this Allele was previously named snp_C01G12.4
    [20090224 db] original Wicks name : C01G12:20966..22723@668 Psnp=0.9430 VarS=GT
    [20090224 db] original Wicks id : eam65c06.s1@231,g,62
    [20090224 db] Snip-SNP
  Method: SNP_Wicks