WormBase Tree Display for Variation: WBVar00242859
expand all nodes | collapse all nodes | view schema
WBVar00242859 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00242859 | |||
Other_name | snp_B0454[4] | ||||
B0454.26.1:c.268-16_268-15insT | |||||
HGVSg | CHROMOSOME_II:g.3037361dup | ||||
Sequence_details | SMap | S_parent | Sequence | B0454 | |
Flanking_sequences | cataggtcttctgcaacaaaaaaaa | cgtttactcgaacttcctgtggtga | |||
Mapping_target | B0454 | ||||
Type_of_mutation | Insertion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00206372 | |||
Transcript | B0454.26.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | B0454.26.1:c.268-16_268-15insT | ||||
Intron_number | 4/6 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9195 VarI1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_B0454.4 | |||||
[20040130 db] this Allele was previously named snp_B0454.4 | |||||
[20090224 db] original Wicks name : B0454:19074..20016@534 Psnp=0.9195 VarI1=A | |||||
[20090224 db] original Wicks id : eam57g04.s1@332,a,53 | |||||
Method | SNP_Wicks |