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WormBase Tree Display for Variation: WBVar00242781

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Name Class

WBVar00242781EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00242781
Other_namesnp_B0218[1]
cewivar00207888
B0218.6b.1:c.448-167G>T
B0218.6a.1:c.820-167G>T
HGVSgCHROMOSOME_IV:g.8162297C>A
Sequence_detailsSMapS_parentSequenceB0218
Flanking_sequencescgctttttttagtcatacctttgtcgactctgtgcagaaattggatcggg
Mapping_targetB0218
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00015050
TranscriptB0218.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0218.6b.1:c.448-167G>T
Intron_number5/5
B0218.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0218.6a.1:c.820-167G>T
Intron_number7/8
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.8002 VarS=AC
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_B0218.1
[20040130 db] this Allele was previously named snp_B0218.1
[20090224 db] original Wicks name : B0218:15081..16051@790 Psnp=0.8002 VarS=AC
[20090224 db] original Wicks id : yw17d08.s1@111,a,35
[20090224 db] Snip-SNP
MethodSNP_Wicks