WormBase Tree Display for Variation: WBVar00242778

WBVar00242778 Name: Public_name: WBVar00242778
    Other_name: snp_B0213[4]
      haw164980
      cewivar00231396
      CE16783:p.Leu448=
      B0213.12.1:c.1344C>T
    HGVSg: CHROMOSOME_V:g.3961962G>A
  Sequence_details: SMap: S_parent: Sequence: B0213
    Flanking_sequences: tcaccaaatacagctcagcttttgc agcgattctccagggcaagatcgtt
    Mapping_target: B0213
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Yanai
          Million_mutation_project_reanalysis
          WGS_Andersen
    Laboratory: QX
    Person: WBPerson4037
      WBPerson1730
    Analysis: SNP_Wicks
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Andersen
    History: Acquires_merge: WBVar01459129
        WBVar00584845
    Status: Live
  Affects: Gene: WBGene00015042
    Transcript: B0213.12.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: B0213.12.1:c.1344C>T
        HGVSp: CE16783:p.Leu448=
        cDNA_position: 1344
        CDS_position: 1344
        Protein_position: 448
        Exon_number: 6/8
        Codon_change: ctC/ctT
        Amino_acid_change: L
  Reference: WBPaper00038208
    WBPaper00040707
    WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9420 VarS=AG
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_B0213.4
    [20040130 db] this Allele was previously named snp_B0213.4
    [20090224 db] original Wicks name : B0213:9385..10200@505 Psnp=0.9420 VarS=AG
    [20090224 db] original Wicks id : vl25g10.s1@427,a,56
    [20090224 db] Snip-SNP
  Method: SNP_Wicks