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WormBase Tree Display for Variation: WBVar00242531

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Name Class

WBVar00242531EvidencePaper_evidenceWBPaper00002847
NamePublic_namesa229
Other_nameCE50312:p.Asp601Asn
Y55D5A.5d.1:c.1801G>A
CE50158:p.Asp572Asn
CE46852:p.Asp648Asn
Y55D5A.5e.1:c.1714G>A
Y55D5A.5c.1:c.1942G>A
Y55D5A.5a.1:c.1942G>A
CE50204:p.Asp648Asn
HGVSgCHROMOSOME_III:g.3012619C>T
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesgggacaaatggtgagaaggcaatctgtgagatatggcaatcaacgtgagcatcacagcgg
Mapping_targetY55D5A
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00002847
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryJT
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5e.1 (12)
Y55D5A.5a.1 (12)
Y55D5A.5c.1 (12)
Y55D5A.5d.1 (12)
GeneticsInterpolated_map_positionIII-8.06138
DescriptionPhenotypeWBPhenotype:0000012Paper_evidenceWBPaper00001923
WBPaper00002847
Curator_confirmedWBPerson712
Remark38.7% Dauer at 25C (n=225), 0% Dauer at 15C (n=546).Paper_evidenceWBPaper00001923
Curator_confirmedWBPerson712
This mutation causes moderate to strong dauer-constitutive phenotype, but is not as strong as nonconditional alleles, for example, mg43.Paper_evidenceWBPaper00002847
Curator_confirmedWBPerson712
PenetranceIncompletePaper_evidenceWBPaper00001923
Curator_confirmedWBPerson712
RecessivePaper_evidenceWBPaper00001923
Curator_confirmedWBPerson712
Temperature_sensitiveHeat_sensitive25Paper_evidenceWBPaper00001923
Curator_confirmedWBPerson712
Phenotype_assayTemperature15C, 25CPaper_evidenceWBPaper00001923
Curator_confirmedWBPerson712
Phenotype_not_observedWBPhenotype:0002212Paper_evidenceWBPaper00001923
Curator_confirmedWBPerson712
ReferenceWBPaper00001923
WBPaper00002847
MethodSubstitution_allele