WormBase Tree Display for Variation: WBVar00241503
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| WBVar00241503 | Evidence | Paper_evidence | WBPaper00001868 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | rh6 | |||||
| Other_name | K11D2.3a.1:c.1009C>T | ||||||
| CE28050:p.Gln337Ter | |||||||
| CE45092:p.Gln188Ter | |||||||
| K11D2.3c.1:c.562C>T | |||||||
| HGVSg | CHROMOSOME_I:g.12512155C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | K11D2 | |||
| Flanking_sequences | agcatcggttcggtgaagtatacgcccgag | aatcggccttcgtatggactattaagaatt | |||||
| Mapping_target | K11D2 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00001868 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | NJ | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006829 | |||||
| Transcript | K11D2.3c.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | K11D2.3c.1:c.562C>T | ||||||
| HGVSp | CE45092:p.Gln188Ter | ||||||
| cDNA_position | 562 | ||||||
| CDS_position | 562 | ||||||
| Protein_position | 188 | ||||||
| Exon_number | 3/4 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| K11D2.3a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | K11D2.3a.1:c.1009C>T | ||||||
| HGVSp | CE28050:p.Gln337Ter | ||||||
| cDNA_position | 1265 | ||||||
| CDS_position | 1009 | ||||||
| Protein_position | 337 | ||||||
| Exon_number | 7/9 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Interactor | WBInteraction000518951 | ||||||
| Genetics | Interpolated_map_position | I | 13.3177 | ||||
| Reference | WBPaper00001868 | ||||||
| Method | Substitution_allele |
