WormBase Tree Display for Variation: WBVar00241491

WBVar00241491 Evidence: Paper_evidence: WBPaper00006005
  Name: Public_name: ra610
    Other_name (30)
    HGVSg: CHROMOSOME_X:g.2717694G>A
  Sequence_details: SMap: S_parent: Sequence: T02C5
    Flanking_sequences: atggctgcagttcaagggaaagattgcgca gagccggctctgctgaaataaactttgaaa
    Mapping_target: T02C5
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: DM
    Status: Live
  Affects: Gene: WBGene00006742
    Transcript: T02C5.5g.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5g.1:c.4201C>T
        HGVSp: CE51886:p.Arg1401Ter
        cDNA_position: 4201
        CDS_position: 4201
        Protein_position: 1401
        Exon_number: 18/29
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5q.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5q.1:c.4009C>T
        HGVSp: CE52709:p.Arg1337Ter
        cDNA_position: 4009
        CDS_position: 4009
        Protein_position: 1337
        Exon_number: 18/28
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5j.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5j.1:c.4006C>T
        HGVSp: CE51856:p.Arg1336Ter
        cDNA_position: 4006
        CDS_position: 4006
        Protein_position: 1336
        Exon_number: 18/29
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5o.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5o.1:c.4411C>T
        HGVSp: CE52764:p.Arg1471Ter
        cDNA_position: 4411
        CDS_position: 4411
        Protein_position: 1471
        Exon_number: 22/32
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5f.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5f.1:c.4201C>T
        HGVSp: CE51879:p.Arg1401Ter
        cDNA_position: 4201
        CDS_position: 4201
        Protein_position: 1401
        Exon_number: 18/30
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5h.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5h.1:c.4201C>T
        HGVSp: CE51907:p.Arg1401Ter
        cDNA_position: 4201
        CDS_position: 4201
        Protein_position: 1401
        Exon_number: 18/29
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5c.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5c.1:c.3733C>T
        HGVSp: CE51899:p.Arg1245Ter
        cDNA_position: 3733
        CDS_position: 3733
        Protein_position: 1245
        Exon_number: 16/28
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5p.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5p.1:c.4567C>T
        HGVSp: CE52692:p.Arg1523Ter
        cDNA_position: 4567
        CDS_position: 4567
        Protein_position: 1523
        Exon_number: 24/34
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5k.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5k.1:c.4006C>T
        HGVSp: CE51839:p.Arg1336Ter
        cDNA_position: 4006
        CDS_position: 4006
        Protein_position: 1336
        Exon_number: 18/28
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5m.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5m.1:c.4006C>T
        HGVSp: CE51867:p.Arg1336Ter
        cDNA_position: 4006
        CDS_position: 4006
        Protein_position: 1336
        Exon_number: 18/28
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5l.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5l.1:c.4006C>T
        HGVSp: CE51857:p.Arg1336Ter
        cDNA_position: 4006
        CDS_position: 4006
        Protein_position: 1336
        Exon_number: 18/29
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5a.1:c.3733C>T
        HGVSp: CE51900:p.Arg1245Ter
        cDNA_position: 3733
        CDS_position: 3733
        Protein_position: 1245
        Exon_number: 16/21
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5n.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5n.1:c.4435C>T
        HGVSp: CE52755:p.Arg1479Ter
        cDNA_position: 4435
        CDS_position: 4435
        Protein_position: 1479
        Exon_number: 22/32
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5i.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5i.1:c.4201C>T
        HGVSp: CE51840:p.Arg1401Ter
        cDNA_position: 4201
        CDS_position: 4201
        Protein_position: 1401
        Exon_number: 18/28
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      T02C5.5b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T02C5.5b.1:c.4135C>T
        HGVSp: CE34980:p.Arg1379Ter
        cDNA_position: 4191
        CDS_position: 4135
        Protein_position: 1379
        Exon_number: 19/30
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
  Genetics: Interpolated_map_position: X -13.8055
  Reference: WBPaper00006005
  Method: Substitution_allele