WormBase Tree Display for Variation: WBVar00241309

WBVar00241309 Evidence: Paper_evidence: WBPaper00001813
  Name: Public_name: r293
    HGVSg: CHROMOSOME_I:g.14855889_14856142del
  Sequence_details: SMap: S_parent: Sequence: F32A7
    Flanking_sequences: tactcttcaacatccctacatgctctttctc aaaaaccgcacacaaaataccttatcatatg
    Mapping_target: F32A7
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00005380
      WBStrain00030606
      WBStrain00030607
      WBStrain00034942
      WBStrain00034946
      WBStrain00034947
      WBStrain00034948
      WBStrain00034951
      WBStrain00034952
      WBStrain00034953
    Laboratory: TR
    Status: Live
  Affects: Gene: WBGene00006789
    Transcript: F11C3.3.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 5963-?
        Exon_number: 11/11
    Interactor (12)
  Genetics: Interpolated_map_position: I 27.9598
  Reference (17)
  Remark: r293 has a 256bp deletion entirely 3' of the unc-54 OFR. The deleted material includes the 3' cleavage site, the polyadeylation site and most of the 3'UTR.
    Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00006789 Genomic_neighbourhood
  Method: Deletion_allele