WormBase Tree Display for Variation: WBVar00241256
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WBVar00241256 | Evidence | Paper_evidence | WBPaper00027195 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | qm57 | |||||
Other_name | CE45622:p.Ser13Phe | ||||||
CE22697:p.Ser254Phe | |||||||
Y62E10A.8b.1:c.38C>T | |||||||
Y62E10A.8a.1:c.761C>T | |||||||
HGVSg | CHROMOSOME_IV:g.13380309C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | Y62E10A | |||
Flanking_sequences | gtggatatgcaagtgattctgataacgaat | tgaggatgatgattgattatacaattatatt | |||||
Mapping_target | Y62E10A | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00027195 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00026664 | ||||||
Laboratory | MQ | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00003142 | |||||
Transcript | Y62E10A.8a.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | Y62E10A.8a.1:c.761C>T | ||||||
HGVSp | CE22697:p.Ser254Phe | ||||||
cDNA_position | 770 | ||||||
CDS_position | 761 | ||||||
Protein_position | 254 | ||||||
Exon_number | 6/7 | ||||||
Codon_change | tCt/tTt | ||||||
Amino_acid_change | S/F | ||||||
Y62E10A.8b.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | Y62E10A.8b.1:c.38C>T | ||||||
HGVSp | CE45622:p.Ser13Phe | ||||||
cDNA_position | 38 | ||||||
CDS_position | 38 | ||||||
Protein_position | 13 | ||||||
Exon_number | 1/1 | ||||||
Codon_change | tCt/tTt | ||||||
Amino_acid_change | S/F | ||||||
Genetics | Interpolated_map_position | IV | 8.83859 | ||||
Description | Phenotype | WBPhenotype:0000062 | Person_evidence | WBPerson261 | |||
Curator_confirmed | WBPerson712 | ||||||
Remark | some lethality; full zygotic and maternal rescue | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Maternal | With_maternal_effect | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0000544 | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | ||||||
Remark | kinky jerky ratchet-like movements in reverse | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0000643 | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | ||||||
Remark | Unc | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0000646 | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | ||||||
Remark | lethargic | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0000651 | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | ||||||
Remark | constipated (Exp) | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0000996 | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | ||||||
Remark | constipated (Exp) | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00027195 | ||||||
Method | Substitution_allele |