WormBase Tree Display for Variation: WBVar00241185

WBVar00241185 Evidence: Paper_evidence: WBPaper00028589
  Name: Public_name: q771
    HGVSg: CHROMOSOME_IV:g.9540710_9541391del
  Sequence_details: SMap: S_parent: Sequence: F56H11
    Flanking_sequences: agcacatgatgatgtgatattatttgatct cagttggattttcagctggatgtttgagaa
    Mapping_target: F56H11
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: JK
    Status: Live
  Affects: Gene: WBGene00001403
    Transcript: F56H11.1e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-340
        CDS_position: ?-340
        Protein_position: ?-114
        Intron_number: 1-2/11
        Exon_number: 1-3/12
      F56H11.1d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-340
        CDS_position: ?-340
        Protein_position: ?-114
        Intron_number: 1-2/11
        Exon_number: 1-3/12
      F56H11.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-384
        CDS_position: ?-340
        Protein_position: ?-114
        Intron_number: 2-3/15
        Exon_number: 1-4/16
      F56H11.1g.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-384
        CDS_position: ?-340
        Protein_position: ?-114
        Intron_number: 2-3/15
        Exon_number: 1-4/16
      F56H11.1h.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-340
        CDS_position: ?-340
        Protein_position: ?-114
        Intron_number: 1-2/11
        Exon_number: 1-3/12
      F56H11.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-386
        CDS_position: ?-340
        Protein_position: ?-114
        Intron_number: 2-3/15
        Exon_number: 1-4/16
      F56H11.1f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-340
        CDS_position: ?-340
        Protein_position: ?-114
        Intron_number: 1-2/11
        Exon_number: 1-3/12
      F56H11.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-357
        CDS_position: ?-340
        Protein_position: ?-114
        Intron_number: 2-3/15
        Exon_number: 1-4/16
  Genetics: Interpolated_map_position: IV 4.30289
  Reference: WBPaper00028589
  Method: Deletion_allele