WormBase Tree Display for Variation: WBVar00240724

WBVar00240724 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00240724
    Other_name: pkP5099
      cewivar00221317
      H24K24.4d.1:c.*535A>T
      H24K24.4a.1:c.*535A>T
    HGVSg: CHROMOSOME_V:g.911528A>T
  Sequence_details: SMap: S_parent: Sequence: H24K24
    Flanking_sequences: gcattgttttgtttttttttatttt aattttccaattgtgcaagtgcgtt
    Mapping_target: H24K24
    Type_of_mutation: Substitution: A T
    PCR_product: snp_pkP5099.amp
    SeqStatus: Sequenced
  Variation_type: SNP
    Confirmed_SNP
    RFLP: Reference_strain_digest: DraI [162, 70, 50, 54]
      Polymorphic_strain_digest: DraI [212, 70, 54]
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00019241
    Transcript: H24K24.4a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: H24K24.4a.1:c.*535A>T
        cDNA_position: 2352
        Exon_number: 8/8
      H24K24.4d.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: H24K24.4d.1:c.*535A>T
        cDNA_position: 724
        Exon_number: 3/3
  Reference: WBPaper00004703
  Method: SNP_Wicks