WormBase Tree Display for Variation: WBVar00240625
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WBVar00240625 | Name | Public_name | WBVar00240625 | ||
---|---|---|---|---|---|
Other_name | pkP4084 | ||||
haw154519 | |||||
cewivar00209282 | |||||
M117.1a.1:c.132+117T>C | |||||
HGVSg | CHROMOSOME_IV:g.11814587T>C | ||||
Sequence_details | SMap | S_parent | Sequence | M117 | |
Flanking_sequences | gaatcgttccagattttccggaatt | caaaagcggtacctagttatttcaa | |||
Mapping_target | M117 | ||||
Type_of_mutation | Substitution | T | C | ||
PCR_product | snp_pkP4084.amp | ||||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Confirmed_SNP | |||||
RFLP | Reference_strain_digest | EcoRI | [473] | ||
Polymorphic_strain_digest | EcoRI | [229, 244] | |||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00574384 | |||
Status | Live | ||||
Affects | Gene | WBGene00010918 | |||
Transcript | M117.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | M117.1a.1:c.132+117T>C | ||||
Intron_number | 2/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Method | SNP_Wicks |