WormBase Tree Display for Variation: WBVar00240559

WBVar00240559 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00240559
    Other_name: pkP3091
      H04J21.3b.1:c.1509+170_1509+309del
      H04J21.3a.1:c.1509+170_1509+309del
    HGVSg: CHROMOSOME_III:g.2356938_2357077del
  Sequence_details: SMap: S_parent: Sequence: H04J21
    Flanking_sequences: gaactctttggatttctaagccacc cgagttgaaattttcggaattttag
    Mapping_target: H04J21
    Type_of_mutation: Deletion: <large>
    PCR_product: snp_pkP3085.amp
    SeqStatus: Sequenced
  Variation_type: SNP
    Confirmed_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00001589
      WBGene00305473
    Transcript: H04J21.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H04J21.3b.1:c.1509+170_1509+309del
        Intron_number: 10/14
      H04J21.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H04J21.3a.1:c.1509+170_1509+309del
        Intron_number: 10/15
      H04J21.5
  Reference: WBPaper00004703
  Remark: [RFLP] PCR - 140bp Deletion Bristol: (750) CB4856: (610)
  Method: SNP_Wicks