WormBase Tree Display for Variation: WBVar00240459
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| WBVar00240459 | Name | Public_name | WBVar00240459 | ||
|---|---|---|---|---|---|
| Other_name | pkP1130 | ||||
| cewivar00171816 | |||||
| F15H9.4.1:c.624-7G>A | |||||
| HGVSg | CHROMOSOME_I:g.12148698C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F15H9 | |
| Flanking_sequences | accaagggtcatggcgtatctgaat | tttaagatttatagtagacatatat | |||
| Mapping_target | F15H9 | ||||
| Type_of_mutation | Substitution | C | T | ||
| PCR_product | snp_pkP1129.amp | ||||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| RFLP | Reference_strain_digest | HinfI | (283, 127, 6) | ||
| Polymorphic_strain_digest | HinfI | (410, 6) | |||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (21) | |||||
| Laboratory | AX | ||||
| Analysis | SNP_Wicks | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01351131 | |||
| WBVar01425460 | |||||
| WBVar01286616 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00005528 | |||
| Transcript | F15H9.4.1 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F15H9.4.1:c.624-7G>A | ||||
| Intron_number | 4/6 | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | SNP_Wicks |
