WormBase Tree Display for Variation: WBVar00240423

WBVar00240423 Name: Public_name: WBVar00240423
    Other_name: pkP1088
      cewivar00073275
      Y47G6A.1.1:c.1369-135G>A
    HGVSg: CHROMOSOME_I:g.3617895G>A
  Sequence_details: SMap: S_parent: Sequence: Y47G6A
    Flanking_sequences: acggagaataataatggcgaaaatt ccgaatttttattgtcgacaaattc
    Mapping_target: Y47G6A
    Type_of_mutation: Substitution: g a
    PCR_product: snp_pkP1087.amp
    SeqStatus: Sequenced
  Variation_type: SNP
    Confirmed_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: SNP_Wicks
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01342928
    Status: Live
  Affects: Gene: WBGene00002143
    Transcript: Y47G6A.1.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.1.1:c.1369-135G>A
        Intron_number: 8/9
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: [RFLP] PCR followed by digestion with MseI.
  Method: SNP_Wicks