WormBase Tree Display for Variation: WBVar00240422
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| WBVar00240422 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00240422 | |||
| Other_name | pkP1087 | ||||
| Y47G6A.1.1:c.1369-125T>A | |||||
| HGVSg | CHROMOSOME_I:g.3617905T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y47G6A | |
| Flanking_sequences | ataatggcgaaaattgccgaatttt | attgtcgacaaattcgacaaaccgg | |||
| Mapping_target | Y47G6A | ||||
| Type_of_mutation | Substitution | t | a | ||
| PCR_product | snp_pkP1087.amp | ||||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| RFLP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
| Analysis | SNP_Wicks | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00002143 | |||
| Transcript | Y47G6A.1.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y47G6A.1.1:c.1369-125T>A | ||||
| Intron_number | 8/9 | ||||
| Reference | WBPaper00004703 | ||||
| Remark | [RFLP] PCR followed by digestion with MwoI. | ||||
| Method | SNP_Wicks |
