WormBase Tree Display for Variation: WBVar00239314

WBVar00239314 Evidence: Person_evidence: WBPerson1519
  Name: Public_name: pk477
    Other_name: pk477df
      M04C7.1.1:c.270_467+85del
    HGVSg: CHROMOSOME_I:g.8533469_8534100del
  Sequence_details: SMap: S_parent: Sequence: M04C7
    Flanking_sequences: aggagtagcaacacttttgaaagcaaagga tttatgaagaaagaaagtacatttcgagac
    Mapping_target: M04C7
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00028941
    Laboratory: NL
    Status: Live
  Affects: Gene: WBGene00001677
    Transcript: M04C7.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: M04C7.1.1:c.270_467+85del
        cDNA_position: 304-?
        CDS_position: 270-?
        Protein_position: 90-?
        Intron_number: 3-4/8
        Exon_number: 3-4/9
  Isolation: Mutagen: EMS Person_evidence: WBPerson1519
    Forward_genetics: EMS library (using PCR)
  Genetics: Interpolated_map_position: I 2.93001
    Mapping_data: In_multi_point: 4381
  Description: Phenotype (18)
    Phenotype_not_observed: WBPhenotype:0001048 Paper_evidence: WBPaper00003465
        Curator_confirmed: WBPerson291
      WBPhenotype:0001414 Paper_evidence: WBPaper00003465
        Curator_confirmed: WBPerson291
      WBPhenotype:0001434 Paper_evidence: WBPaper00003465
        Curator_confirmed: WBPerson291
      WBPhenotype:0001765 Paper_evidence: WBPaper00031936
        Curator_confirmed: WBPerson2021
        Remark: Animals with mutations in individual G protein subunits respond normally to CO2 Paper_evidence: WBPaper00031936
            Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000057 PATO:0000460 Paper_evidence: WBPaper00031936
                Curator_confirmed: WBPerson2021
        Phenotype_assay: Treatment: 10% CO2 Paper_evidence: WBPaper00031936
              Curator_confirmed: WBPerson2021
      WBPhenotype:0001838 Paper_evidence: WBPaper00035254
        Curator_confirmed: WBPerson2021
        Remark: Mutants do not affect pheromone-mediated downregulation of str-3p::gfp expression Paper_evidence: WBPaper00035254
            Curator_confirmed: WBPerson2021
      WBPhenotype:0002535 Paper_evidence: WBPaper00003465
        Curator_confirmed: WBPerson291
  Reference: WBPaper00043908
    WBPaper00031936
    WBPaper00003465
    WBPaper00035254
  Method: Deletion_allele