WormBase Tree Display for Variation: WBVar00239299
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| WBVar00239299 | Evidence | Paper_evidence | WBPaper00031936 | ||
|---|---|---|---|---|---|
| Name | Public_name | pk376 | |||
| Other_name | pk376te | ||||
| HGVSg | CHROMOSOME_X:g.2118825_2121212del | ||||
| Sequence_details | SMap | S_parent | Sequence | F53B1 | |
| Flanking_sequences | tcttcattatttttttcatagaatctgagt | aaacacccatttttgtgtttaaccatgcgg | |||
| Mapping_target | F53B1 | ||||
| Type_of_mutation | Insertion | ||||
| Deletion | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Transposon_insertion | Tc1 | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00007863 | ||||
| WBStrain00028947 | |||||
| Laboratory | NL | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00001667 | |||
| Transcript | F53B1.7.1 | VEP_consequence | transcript_ablation | ||
| VEP_impact | HIGH | ||||
| Intron_number | 1-7/7 | ||||
| Exon_number | 1-8/8 | ||||
| Interactor | WBInteraction000502424 | ||||
| Isolation | Mutagen | Tc1 | |||
| Reverse_genetics | Tc1-derived deletion | ||||
| Genetics | Interpolated_map_position | X | -17.0396 | ||
| Mapping_data | In_multi_point | 4371 | |||
| Description (2) | |||||
| Reference | WBPaper00043908 | ||||
| WBPaper00031936 | |||||
| WBPaper00003465 | |||||
| Remark | Insertion is a tc1 element | ||||
| Method | Transposon_insertion |
