WormBase Tree Display for Variation: WBVar00239267

WBVar00239267 Evidence: Paper_evidence: WBPaper00005150
  Name: Public_name: pk298
    Other_name: pk298te
      K02A4.2.2:c.-18-582_83+37del
      K02A4.2.3:c.-18-582_83+37del
    HGVSg: CHROMOSOME_X:g.12882292_12883011del
  Sequence_details: SMap: S_parent: Sequence: K02A4
    Flanking_sequences: aattattaaaaattaacatttttctggcca gagaataggtatctatttttagtattgcta
    Mapping_target: K02A4
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00028937
    Laboratory: NL
    Status: Live
  Affects: Gene: WBGene00001681
    Transcript: K02A4.2.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/3
        Exon_number: 1-2/4
      K02A4.2.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K02A4.2.2:c.-18-582_83+37del
        Intron_number: 2-4/5
        Exon_number: 3-4/6
      K02A4.2.3 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K02A4.2.3:c.-18-582_83+37del
        Intron_number: 1-3/4
        Exon_number: 2-3/5
    Interactor: WBInteraction000502742
  Genetics: Interpolated_map_position: X 8.81488
    Mapping_data: In_multi_point: 5508
  Description: Phenotype (17)
    Phenotype_not_observed: WBPhenotype:0000535 Paper_evidence: WBPaper00005150
        Curator_confirmed: WBPerson48
      WBPhenotype:0000640 Paper_evidence: WBPaper00005150
        Curator_confirmed: WBPerson48
      WBPhenotype:0000643 Paper_evidence: WBPaper00005150
        Curator_confirmed: WBPerson48
      WBPhenotype:0001084 Paper_evidence: WBPaper00005150
        Curator_confirmed: WBPerson48
        Phenotype_assay: Treatment: ten minute timepoint for assays Paper_evidence: WBPaper00005150
              Curator_confirmed: WBPerson48
      WBPhenotype:0001435 Paper_evidence: WBPaper00005150
        Curator_confirmed: WBPerson48
        Phenotype_assay: Treatment: ten minute timepoint for assays Paper_evidence: WBPaper00005150
              Curator_confirmed: WBPerson48
      WBPhenotype:0001442 Paper_evidence: WBPaper00005150
        Curator_confirmed: WBPerson48
        Phenotype_assay: Treatment: ten minute timepoint for assays Paper_evidence: WBPaper00005150
              Curator_confirmed: WBPerson48
      WBPhenotype:0001484 Paper_evidence: WBPaper00005150
        Curator_confirmed: WBPerson48
        Phenotype_assay: Treatment: ten minute timepoint for assays Paper_evidence: WBPaper00005150
              Curator_confirmed: WBPerson48
      WBPhenotype:0001765 Paper_evidence: WBPaper00031936
        Curator_confirmed: WBPerson2021
        Remark: Animals with mutations in individual G protein subunits respond normally to CO2 Paper_evidence: WBPaper00031936
            Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000057 PATO:0000460 Paper_evidence: WBPaper00031936
                Curator_confirmed: WBPerson2021
        Phenotype_assay: Treatment: 10% CO2 Paper_evidence: WBPaper00031936
              Curator_confirmed: WBPerson2021
      WBPhenotype:0001817 Paper_evidence: WBPaper00032335
        Curator_confirmed: WBPerson712
        Remark: Animals exhibited enhanced-gustatory plasticity, i.e. strong avoidance to NaCl after starvation, similar to that observed for wild type. Paper_evidence: WBPaper00032335
            Curator_confirmed: WBPerson712
        Affected_by: Molecule: WBMol:00003571 Paper_evidence: WBPaper00032335
              Curator_confirmed: WBPerson712
  Reference: WBPaper00043908
    WBPaper00031936
    WBPaper00032335
    WBPaper00005150
  Method: Deletion_allele