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WormBase Tree Display for Variation: WBVar00233306

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Name Class

WBVar00233306NamePublic_nameWBVar00233306
Other_namepas45082
C45E1.1a.2:c.146-630_146-629insT
C45E1.1c.1:c.164-630_164-629insT
C45E1.1a.1:c.146-630_146-629insT
C45E1.1b.1:c.145+1016_145+1017insT
HGVSgCHROMOSOME_I:g.3105528_3105529insT
Sequence_detailsSMapS_parentSequenceC45E1
Flanking_sequencesgtgaactgagaatttggaggagaaagcttgtgtgagccctctccagagagaaaagggtttctctttttaatgctccaacggctcttgaaatcttgggggggggggtcacatttcgttccggaataacaaaagatgtatagagaaaccgattttttagacgatttccttttcggaaagcaaaaaaggcgggaaaagaggcgcggagcggctttttaacggagaattcttgggatagagtagcgcagaagacgataattataagtttttcatactttgagaagaaaaatgcaaaaaaaaaaatacaaaaaaagcggagaaaatctaaagaaatcgaaaaaaagagcgaaaaattccgcgaaaacaatttaaacacttcacagtaccacctgttaaaggcgcatagccaattattttcagtgggtctcggcacgaaaactttttaatagcgcccaagactataagatgtggcttaaatgttttgataaaattgaaaattgaaaattgaaaattctaagttttaaataacaaattcttcaaaattttgcagttatatttctgtaaaatcaacgaagcaaaattaaatgcggtacagtacgttta
Mapping_targetC45E1
Type_of_mutationInsertionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004604From_analysisWGS_Pasadena_Quinlan
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
StatusLive
AffectsGeneWBGene00003654
TranscriptC45E1.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1b.1:c.145+1016_145+1017insT
Intron_number1/6
C45E1.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1c.1:c.164-630_164-629insT
Intron_number2/8
C45E1.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1a.2:c.146-630_146-629insT
Intron_number3/10
C45E1.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1a.1:c.146-630_146-629insT
Intron_number2/9
MethodWGS_Pasadena_Quinlan